Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CALAB_RS06070 | Not Available | Positive | 1544726 - 1545856 | 42849.9 |
| efflux rnd transporter permease subunit | CALAB_RS06075 | Not Available | Positive | 1545890 - 1549696 | 141568.0 |
| efflux rnd transporter permease subunit | CALAB_RS06080 | Not Available | Positive | 1549696 - 1552851 | 119349.0 |
| tolc family protein | CALAB_RS06090 | Not Available | Negative | 1553188 - 1554699 | 58648.4 |
| lipid-a-disaccharide synthase | CALAB_RS06095 | Not Available | Positive | 1555060 - 1556193 | 42719.9 |
| heavy metal translocating p-type atpase | CALAB_RS06100 | Not Available | Positive | 1556209 - 1558665 | 88825.5 |
| class i sam-dependent methyltransferase | CALAB_RS06105 | Not Available | Positive | 1558729 - 1559397 | 25827.6 |
| sigma-54-dependent transcriptional regulator | CALAB_RS06110 | Not Available | Positive | 1559546 - 1560907 | 51324.2 |
| nudix hydrolase | CALAB_RS06115 | Not Available | Positive | 1560917 - 1561582 | 25541.6 |
| molecular chaperone htpg | CALAB_RS06120 | Not Available | Positive | 1561943 - 1563856 | 73942.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
