Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | CALAB_RS05970 | Not Available | Negative | 1522603 - 1524270 | 62805.1 |
| dtmp kinase | CALAB_RS05975 | Not Available | Negative | 1524267 - 1524902 | 24349.4 |
| mate family efflux transporter | CALAB_RS05980 | Not Available | Negative | 1524902 - 1526242 | 49257.1 |
| inositol-3-phosphate synthase | CALAB_RS05985 | Not Available | Negative | 1526436 - 1527761 | 50748.8 |
| cdp-alcohol phosphatidyltransferase family protein | CALAB_RS05990 | Not Available | Negative | 1527773 - 1528435 | 24643.6 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CALAB_RS05995 | Not Available | Negative | 1528422 - 1529132 | 26225.2 |
| nad+ synthase | CALAB_RS06000 | Not Available | Negative | 1529135 - 1529962 | 31575.1 |
| zinc-ribbon domain-containing protein | CALAB_RS06005 | Not Available | Negative | 1530231 - 1531409 | 44416.3 |
| saccharopine dehydrogenase c-terminal domain-containing protein | CALAB_RS06010 | Not Available | Negative | 1531674 - 1532996 | 49463.3 |
| sigma-70 family rna polymerase sigma factor | CALAB_RS06015 | Not Available | Positive | 1533671 - 1534252 | 22850.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
