Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent flavin oxidoreductase | CALAB_RS05925 | Not Available | Positive | 1511859 - 1512986 | 41496.6 |
| is1182 family transposase | CALAB_RS05930 | Not Available | Positive | 1513344 - 1514930 | 61382.2 |
| hypothetical protein | CALAB_RS05935 | Not Available | Positive | 1515699 - 1515893 | 7785.6 |
| pin domain-containing protein | CALAB_RS21955 | Not Available | Positive | 1515881 - 1516087 | 7792.53 |
| hypothetical protein | CALAB_RS21670 | Not Available | Negative | 1516162 - 1516536 | 14682.0 |
| is1634 family transposase | CALAB_RS05950 | Not Available | Negative | 1516721 - 1517821 | 42332.2 |
| pin domain-containing protein | CALAB_RS21960 | Not Available | Positive | 1517970 - 1518155 | 7103.61 |
| lea type 2 family protein | CALAB_RS05955 | Not Available | Negative | 1519148 - 1520011 | 32426.2 |
| mechanosensitive ion channel family protein | CALAB_RS05960 | Not Available | Negative | 1520008 - 1520841 | 30574.6 |
| cca trna nucleotidyltransferase | CALAB_RS05965 | Not Available | Negative | 1521097 - 1522521 | 55217.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
