Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | CALAB_RS00365 | Not Available | Negative | 101951 - 102979 | 40083.8 |
| brxa/brxb family bacilliredoxin | CALAB_RS00375 | Not Available | Positive | 103277 - 103720 | 16344.5 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | CALAB_RS00380 | Not Available | Negative | 103822 - 104316 | 18923.9 |
| alpha/beta fold hydrolase | CALAB_RS00385 | Not Available | Negative | 104313 - 105338 | 38707.9 |
| askha domain-containing protein | CALAB_RS00390 | Not Available | Negative | 105348 - 107231 | 68405.5 |
| pas domain-containing sensor histidine kinase | CALAB_RS19565 | Not Available | Negative | 107244 - 110186 | 112131.0 |
| cdp-alcohol phosphatidyltransferase family protein | CALAB_RS00400 | Not Available | Positive | 110437 - 111069 | 23586.0 |
| glycerophosphodiester phosphodiesterase | CALAB_RS19570 | Not Available | Positive | 111071 - 111775 | 27778.0 |
| energy transducer tonb | CALAB_RS00410 | Not Available | Positive | 111841 - 112425 | 22281.6 |
| ybjq family protein | CALAB_RS00415 | Not Available | Negative | 112534 - 112854 | 11494.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
