Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trp family transcriptional regulator | CALAB_RS05825 | Not Available | Negative | 1485896 - 1486174 | 10559.0 |
| sdr family oxidoreductase | CALAB_RS05830 | Not Available | Negative | 1486528 - 1487241 | 26339.1 |
| gtp cyclohydrolase i fole | CALAB_RS05835 | Not Available | Negative | 1487225 - 1487797 | 21602.6 |
| 6-carboxytetrahydropterin synthase | CALAB_RS21515 | Not Available | Negative | 1487801 - 1488217 | 16371.3 |
| 6-pyruvoyl trahydropterin synthase family protein | CALAB_RS21520 | Not Available | Negative | 1488214 - 1488639 | 16631.8 |
| glycosyltransferase family 4 protein | CALAB_RS05850 | Not Available | Negative | 1488690 - 1489784 | 40586.8 |
| response regulator | CALAB_RS19820 | Not Available | Negative | 1489777 - 1491555 | 68023.5 |
| hypothetical protein | CALAB_RS05860 | Not Available | Positive | 1491686 - 1492129 | 16908.4 |
| tonb-dependent receptor | CALAB_RS05865 | Not Available | Positive | 1492322 - 1494778 | 94469.6 |
| thiamine diphosphokinase | CALAB_RS19825 | Not Available | Positive | 1494823 - 1495455 | 23663.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
