Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed family protein | CALAB_RS05775 | Not Available | Negative | 1467999 - 1469294 | 46671.8 |
| duf5916 domain-containing protein | CALAB_RS05780 | Not Available | Negative | 1470486 - 1473131 | 101344.0 |
| duf4352 domain-containing protein | CALAB_RS05785 | Not Available | Negative | 1473238 - 1474614 | 51784.1 |
| hypothetical protein | CALAB_RS05790 | Not Available | Negative | 1474642 - 1475175 | 20490.5 |
| hypothetical protein | CALAB_RS19810 | Not Available | Negative | 1475179 - 1475652 | 18042.0 |
| mota/tolq/exbb proton channel family protein | CALAB_RS05800 | Not Available | Negative | 1475669 - 1477036 | 51473.1 |
| tetratricopeptide repeat protein | CALAB_RS05805 | Not Available | Negative | 1477081 - 1481862 | 185635.0 |
| oligoendopeptidase f | CALAB_RS05810 | Not Available | Positive | 1482161 - 1484056 | 72813.3 |
| hypothetical protein | CALAB_RS05815 | Not Available | Negative | 1484088 - 1484348 | 10399.6 |
| trpb-like pyridoxal phosphate-dependent enzyme | CALAB_RS05820 | Not Available | Negative | 1484509 - 1485873 | 49789.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
