Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate diphosphokinase | CALAB_RS05725 | Not Available | Positive | 1454518 - 1455564 | 38639.2 |
| 8-oxo-dgtp diphosphatase mutt | CALAB_RS05730 | Not Available | Positive | 1455710 - 1456156 | 17166.6 |
| wd40/yvtn/bnr-like repeat-containing protein | CALAB_RS05735 | Not Available | Positive | 1456450 - 1457697 | 48208.9 |
| sialidase family protein | CALAB_RS05740 | Not Available | Positive | 1457884 - 1459872 | 76626.6 |
| hypothetical protein | CALAB_RS05745 | Not Available | Positive | 1460185 - 1461552 | 52263.8 |
| mxan_6640 family putative metalloprotease | CALAB_RS05750 | Not Available | Positive | 1461700 - 1463841 | 81086.9 |
| nif3-like dinuclear metal center hexameric protein | CALAB_RS05755 | Not Available | Negative | 1464307 - 1465059 | 28333.4 |
| trap transporter substrate-binding protein dctp | CALAB_RS05760 | Not Available | Negative | 1465090 - 1466100 | 38384.9 |
| trap transporter tatt component family protein | CALAB_RS05765 | Not Available | Negative | 1466121 - 1466993 | 33104.5 |
| slipin family protein | CALAB_RS05770 | Not Available | Negative | 1467194 - 1467982 | 29625.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
