Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline/carnitine o-acyltransferase | CALAB_RS05675 | Not Available | Negative | 1440761 - 1442533 | 68067.1 |
| sodium-dependent transporter | CALAB_RS05680 | Not Available | Negative | 1442626 - 1443972 | 48207.2 |
| pega domain-containing protein | CALAB_RS05685 | Not Available | Positive | 1445401 - 1446585 | 43481.6 |
| t9ss-dependent choice-of-anchor j family protein | CALAB_RS19800 | Not Available | Positive | 1446596 - 1448491 | 69520.4 |
| t9ss type a sorting domain-containing protein | CALAB_RS19805 | Not Available | Positive | 1448575 - 1450008 | 52315.8 |
| tlpa family protein disulfide reductase | CALAB_RS05700 | Not Available | Positive | 1450052 - 1450537 | 18641.6 |
| duf6029 family protein | CALAB_RS05705 | Not Available | Positive | 1450547 - 1451959 | 56529.8 |
| duf1684 domain-containing protein | CALAB_RS05710 | Not Available | Positive | 1452110 - 1452733 | 24195.8 |
| 3'(2'),5'-bisphosphate nucleotidase | CALAB_RS05715 | Not Available | Positive | 1452749 - 1453702 | 34802.6 |
| inositol monophosphatase family protein | CALAB_RS05720 | Not Available | Positive | 1453705 - 1454502 | 29944.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
