Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynce family protein | CALAB_RS05610 | Not Available | Negative | 1420192 - 1421247 | 37647.5 |
| tonb-dependent receptor plug domain-containing protein | CALAB_RS05615 | Not Available | Negative | 1421250 - 1423397 | 80227.1 |
| c25 family cysteine peptidase | CALAB_RS05625 | Not Available | Negative | 1424106 - 1428776 | 173353.0 |
| (2fe-2s)-binding protein | CALAB_RS05640 | Not Available | Positive | 1430760 - 1431368 | 21757.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | CALAB_RS05645 | Not Available | Positive | 1431384 - 1433678 | 83736.5 |
| fad binding domain-containing protein | CALAB_RS05650 | Not Available | Positive | 1433695 - 1434675 | 35629.2 |
| xdhc family protein | CALAB_RS05655 | Not Available | Positive | 1435538 - 1436344 | 29865.2 |
| ntp transferase domain-containing protein | CALAB_RS05660 | Not Available | Positive | 1436351 - 1436962 | 22948.0 |
| m1 family aminopeptidase | CALAB_RS05665 | Not Available | Negative | 1436972 - 1438927 | 75222.5 |
| abc transporter atp-binding protein | CALAB_RS05670 | Not Available | Negative | 1438929 - 1440683 | 66374.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
