Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CALAB_RS05505 | Not Available | Negative | 1398678 - 1399598 | 35304.2 |
| yigz family protein | CALAB_RS05510 | Not Available | Negative | 1399600 - 1400205 | 22734.0 |
| Trna-asp | Not Available | Not Available | Positive | 1400427 - 1400501 | Not Available |
| gaf and hd-gyp domain-containing protein | CALAB_RS05525 | Not Available | Positive | 1400743 - 1401987 | 47067.2 |
| nadh-quinone oxidoreductase subunit a | CALAB_RS05530 | Not Available | Positive | 1402247 - 1402663 | 15687.7 |
| nadh-quinone oxidoreductase subunit b | CALAB_RS05535 | Not Available | Positive | 1402667 - 1403305 | 23971.3 |
| zinc-ribbon domain-containing protein | CALAB_RS05540 | Not Available | Positive | 1403299 - 1405092 | 69118.6 |
| nadh-quinone oxidoreductase subunit nuoe | CALAB_RS05545 | Not Available | Positive | 1405113 - 1405577 | 17701.4 |
| nadh-quinone oxidoreductase subunit nuof | CALAB_RS05550 | Not Available | Positive | 1405592 - 1406863 | 46577.0 |
| nadh-quinone oxidoreductase subunit nuog | CALAB_RS05555 | Not Available | Positive | 1406866 - 1409565 | 100706.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
