Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp2c family protein-serine/threonine phosphatase | CALAB_RS05460 | Not Available | Negative | 1388117 - 1390663 | 98406.1 |
| Trna-val | Not Available | Not Available | Positive | 1390862 - 1390936 | Not Available |
| hypothetical protein | CALAB_RS20650 | Not Available | Negative | 1390927 - 1391178 | 9107.82 |
| mlad family protein | CALAB_RS05470 | Not Available | Positive | 1391310 - 1392293 | 36432.8 |
| abc-type transport auxiliary lipoprotein family protein | CALAB_RS05475 | Not Available | Positive | 1392274 - 1392897 | 24422.9 |
| abc transporter permease | CALAB_RS05480 | Not Available | Positive | 1392909 - 1394000 | 39609.3 |
| abc transporter atp-binding protein | CALAB_RS05485 | Not Available | Positive | 1394000 - 1394731 | 26669.1 |
| hypothetical protein | CALAB_RS05490 | Not Available | Positive | 1394832 - 1396769 | 75017.3 |
| carbonic anhydrase | CALAB_RS05495 | Not Available | Negative | 1396788 - 1397162 | 14227.1 |
| abc transporter permease | CALAB_RS05500 | Not Available | Negative | 1397179 - 1398681 | 58053.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
