Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS05410 | Not Available | Positive | 1376460 - 1376915 | 17615.7 |
| hypothetical protein | CALAB_RS05415 | Not Available | Positive | 1377041 - 1377316 | 10645.5 |
| hypothetical protein | CALAB_RS05420 | Not Available | Positive | 1377606 - 1378625 | 39074.9 |
| ompp1/fadl family transporter | CALAB_RS05425 | Not Available | Positive | 1378654 - 1380099 | 54575.1 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | CALAB_RS05430 | Not Available | Negative | 1380182 - 1380937 | 27520.3 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | CALAB_RS05435 | Not Available | Negative | 1380949 - 1382859 | 71646.0 |
| succinate dehydrogenase cytochrome b subunit | CALAB_RS05440 | Not Available | Negative | 1382856 - 1383551 | 26589.9 |
| is110 family transposase | CALAB_RS05445 | Not Available | Positive | 1384182 - 1385000 | 31579.8 |
| is1182 family transposase | CALAB_RS05450 | Not Available | Positive | 1385290 - 1386909 | 63448.2 |
| transposase | CALAB_RS05455 | Not Available | Positive | 1387036 - 1387548 | 19430.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
