Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | CALAB_RS00310 | Not Available | Negative | 88001 - 89035 | 37942.1 |
| holliday junction resolvase ruvx | CALAB_RS00315 | Not Available | Negative | 89054 - 89467 | 15392.0 |
| hu family dna-binding protein | CALAB_RS00320 | Not Available | Negative | 89502 - 89822 | 12262.0 |
| is110 family transposase | CALAB_RS00330 | Not Available | Negative | 90967 - 92208 | 47440.1 |
| dna mismatch repair protein muts | CALAB_RS00335 | Not Available | Negative | 92547 - 95201 | 100607.0 |
| atp-binding protein | CALAB_RS00340 | Not Available | Negative | 95208 - 98282 | 117992.0 |
| type iii pantothenate kinase | CALAB_RS00345 | Not Available | Negative | 98368 - 99186 | 30516.3 |
| biotin--[acetyl-coa-carboxylase] ligase | CALAB_RS00350 | Not Available | Negative | 99131 - 99913 | 29511.6 |
| acyl-coa dehydrogenase | CALAB_RS00355 | Not Available | Negative | 100100 - 101257 | 42070.5 |
| atp-binding protein | CALAB_RS00360 | Not Available | Negative | 101383 - 101958 | 22288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
