Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5777 family beta-barrel protein | CALAB_RS05315 | Not Available | Positive | 1357966 - 1358805 | 31364.2 |
| cytochrome p460 family protein | CALAB_RS05320 | Not Available | Positive | 1358832 - 1359356 | 19021.1 |
| nucleotidyltransferase domain-containing protein | CALAB_RS05325 | Not Available | Negative | 1359526 - 1359849 | 12668.2 |
| is1182 family transposase | CALAB_RS05330 | Not Available | Positive | 1360104 - 1361690 | 61382.2 |
| is1634 family transposase | CALAB_RS05335 | Not Available | Negative | 1362062 - 1363711 | 64178.4 |
| hypothetical protein | CALAB_RS05340 | Not Available | Negative | 1364002 - 1364208 | 7763.99 |
| interleukin-like emt inducer domain-containing protein | CALAB_RS21505 | Not Available | Negative | 1364434 - 1366104 | 62593.9 |
| hypothetical protein | CALAB_RS05350 | Not Available | Negative | 1366156 - 1366686 | 20725.2 |
| hypothetical protein | CALAB_RS05355 | Not Available | Negative | 1366967 - 1367770 | 31517.1 |
| rhs repeat domain-containing protein | CALAB_RS19795 | Not Available | Negative | 1367772 - 1368635 | 32534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
