Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1634 family transposase | CALAB_RS05265 | Not Available | Positive | 1342380 - 1343552 | 45875.4 |
| p-loop atpase, sll1717 family | CALAB_RS05270 | Not Available | Negative | 1343765 - 1346137 | 93039.5 |
| hypothetical protein | CALAB_RS05275 | Not Available | Negative | 1347758 - 1348018 | 10202.4 |
| zinc-ribbon domain-containing protein | CALAB_RS05280 | Not Available | Negative | 1348153 - 1349142 | 37910.4 |
| amp-dependent synthetase/ligase | CALAB_RS05285 | Not Available | Positive | 1349477 - 1351435 | 74245.5 |
| is200/is605 family transposase | CALAB_RS05290 | Not Available | Negative | 1351458 - 1351901 | 17586.4 |
| is1634 family transposase | CALAB_RS05295 | Not Available | Positive | 1352589 - 1354385 | 70253.2 |
| fused mfs/spermidine synthase | CALAB_RS05300 | Not Available | Negative | 1354482 - 1356767 | 86732.8 |
| c-type cytochrome domain-containing protein | CALAB_RS05305 | Not Available | Positive | 1356886 - 1357287 | 14558.5 |
| ycei family protein | CALAB_RS05310 | Not Available | Positive | 1357391 - 1357963 | 22263.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
