Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | CALAB_RS05210 | Not Available | Negative | 1332761 - 1333426 | 25017.6 |
| transporter substrate-binding domain-containing protein | CALAB_RS05215 | Not Available | Negative | 1333431 - 1334294 | 32336.2 |
| hypothetical protein | CALAB_RS05220 | Not Available | Negative | 1334475 - 1334990 | 19734.4 |
| hypothetical protein | CALAB_RS05225 | Not Available | Negative | 1335002 - 1335778 | 29980.7 |
| hypothetical protein | CALAB_RS05230 | Not Available | Negative | 1335912 - 1336649 | 29243.0 |
| type ii toxin-antitoxin system rele/pare family toxin | CALAB_RS05240 | Not Available | Negative | 1337935 - 1338228 | 11515.2 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | CALAB_RS05245 | Not Available | Negative | 1338228 - 1338506 | 10739.1 |
| hypothetical protein | CALAB_RS05250 | Not Available | Negative | 1339474 - 1340409 | 37616.9 |
| duf3800 domain-containing protein | CALAB_RS05255 | Not Available | Negative | 1340546 - 1341367 | 32909.1 |
| hypothetical protein | CALAB_RS21665 | Not Available | Positive | 1341892 - 1342365 | 18293.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
