Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | CALAB_RS05065 | Not Available | Negative | 1292634 - 1293053 | 15918.3 |
| t9ss type a sorting domain-containing protein | CALAB_RS19780 | Not Available | Positive | 1294078 - 1295970 | 69594.1 |
| hypothetical protein | CALAB_RS05075 | Not Available | Negative | 1296004 - 1296204 | 7584.27 |
| pilz domain-containing protein | CALAB_RS05080 | Not Available | Positive | 1296372 - 1296779 | 15405.5 |
| dicarboxylate/amino acid:cation symporter | CALAB_RS05085 | Not Available | Positive | 1296864 - 1298114 | 44645.3 |
| sensor histidine kinase | CALAB_RS05090 | Not Available | Negative | 1298111 - 1299202 | 41540.1 |
| shoct domain-containing protein | CALAB_RS21865 | Not Available | Positive | 1299569 - 1299802 | 8639.64 |
| hypothetical protein | CALAB_RS05100 | Not Available | Positive | 1299873 - 1300472 | 23152.1 |
| transporter | CALAB_RS05105 | Not Available | Positive | 1300469 - 1301296 | 30521.6 |
| duf2231 domain-containing protein | CALAB_RS19785 | Not Available | Positive | 1301319 - 1302473 | 42657.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
