Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | CALAB_RS05015 | Not Available | Negative | 1282959 - 1283951 | 37266.9 |
| smp-30/gluconolactonase/lre family protein | CALAB_RS05020 | Not Available | Positive | 1284040 - 1284948 | 33424.2 |
| duf6599 family protein | CALAB_RS05025 | Not Available | Positive | 1284935 - 1285825 | 33992.9 |
| duf362 domain-containing protein | CALAB_RS05030 | Not Available | Positive | 1285837 - 1286727 | 33449.2 |
| duf1648 domain-containing protein | CALAB_RS05035 | Not Available | Negative | 1286779 - 1287300 | 20443.6 |
| hypothetical protein | CALAB_RS05040 | Not Available | Negative | 1287281 - 1288147 | 32526.7 |
| m48 family metallopeptidase | CALAB_RS05045 | Not Available | Negative | 1288159 - 1288956 | 29649.4 |
| hdod domain-containing protein | CALAB_RS05050 | Not Available | Positive | 1289105 - 1290124 | 39294.9 |
| hemerythrin domain-containing protein | CALAB_RS05055 | Not Available | Negative | 1290132 - 1290620 | 19589.4 |
| alpha/beta hydrolase family protein | CALAB_RS05060 | Not Available | Negative | 1290699 - 1292618 | 73667.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
