Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c1 family peptidase | CALAB_RS04965 | Not Available | Negative | 1271870 - 1273048 | 46464.2 |
| cyclic nucleotide-binding domain-containing protein | CALAB_RS04970 | Not Available | Positive | 1273199 - 1273723 | 20142.5 |
| ai-2e family transporter | CALAB_RS04975 | Not Available | Positive | 1273723 - 1274763 | 38107.4 |
| hypothetical protein | CALAB_RS04980 | Not Available | Positive | 1274777 - 1275172 | 15665.8 |
| mth1187 family thiamine-binding protein | CALAB_RS04985 | Not Available | Positive | 1275386 - 1275694 | 11907.8 |
| trypsin-like peptidase domain-containing protein | CALAB_RS04990 | Not Available | Positive | 1275694 - 1277025 | 48866.6 |
| pdz domain-containing protein | CALAB_RS04995 | Not Available | Positive | 1277022 - 1278440 | 54097.6 |
| dutpase | CALAB_RS05000 | Not Available | Positive | 1278437 - 1278913 | 19165.5 |
| is1182 family transposase | CALAB_RS05005 | Not Available | Negative | 1279473 - 1281059 | 61382.2 |
| ammememoradisam system protein b | CALAB_RS21280 | Not Available | Positive | 1281355 - 1282809 | 53324.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
