Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | CALAB_RS04915 | Not Available | Positive | 1257408 - 1258661 | 47831.1 |
| hypothetical protein | CALAB_RS04920 | Not Available | Negative | 1258831 - 1260045 | 45370.7 |
| spor domain-containing protein | CALAB_RS04925 | Not Available | Negative | 1260057 - 1260830 | 29527.9 |
| spoiid/lytb domain-containing protein | CALAB_RS04930 | Not Available | Negative | 1260830 - 1262062 | 47078.9 |
| alpha-amylase family glycosyl hydrolase | CALAB_RS04935 | Not Available | Positive | 1262152 - 1264776 | 102775.0 |
| tetratricopeptide repeat protein | CALAB_RS04940 | Not Available | Positive | 1264855 - 1265598 | 29599.1 |
| alpha-amylase family glycosyl hydrolase | CALAB_RS04945 | Not Available | Negative | 1265813 - 1269247 | 134049.0 |
| dmt family transporter | CALAB_RS04950 | Not Available | Positive | 1269493 - 1270413 | 34776.9 |
| peptidylprolyl isomerase | CALAB_RS04955 | Not Available | Negative | 1270798 - 1271457 | 24432.1 |
| hypothetical protein | CALAB_RS04960 | Not Available | Positive | 1271625 - 1271846 | 8812.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
