Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase glga | CALAB_RS04865 | Not Available | Positive | 1246800 - 1248287 | 56574.5 |
| d-glycero-alpha-d-manno-heptose-1,7- bisphosphate 7-phosphatase | CALAB_RS04870 | Not Available | Positive | 1248381 - 1248953 | 21295.8 |
| hypothetical protein | CALAB_RS04875 | Not Available | Positive | 1249024 - 1250262 | 47745.7 |
| hypothetical protein | CALAB_RS04880 | Not Available | Positive | 1250263 - 1251462 | 45828.0 |
| tetratricopeptide repeat protein | CALAB_RS04885 | Not Available | Positive | 1251487 - 1252764 | 49893.8 |
| ribose 5-phosphate isomerase b | CALAB_RS04890 | Not Available | Positive | 1252775 - 1253215 | 15969.3 |
| serine hydroxymethyltransferase | CALAB_RS04895 | Not Available | Positive | 1253231 - 1254523 | 46935.5 |
| twin-arginine translocase subunit tatc | CALAB_RS04900 | Not Available | Positive | 1254587 - 1255330 | 28434.1 |
| polyprenyl synthetase family protein | CALAB_RS04905 | Not Available | Positive | 1255415 - 1256389 | 36312.4 |
| glycosyltransferase family 9 protein | CALAB_RS04910 | Not Available | Positive | 1256393 - 1257406 | 39231.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
