Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii-a crispr-associated ramp protein csm4 | CALAB_RS00260 | Not Available | Negative | 77371 - 78390 | 38401.1 |
| type iii-a crispr-associated ramp protein csm3 | CALAB_RS00265 | Not Available | Negative | 78394 - 79119 | 26727.8 |
| type iii-a crispr-associated protein csm2 | CALAB_RS00270 | Not Available | Negative | 79163 - 79549 | 14915.0 |
| type iii-a crispr-associated protein cas10/csm1 | CALAB_RS00275 | Not Available | Negative | 79566 - 82079 | 95954.4 |
| crispr system precrrna processing endoribonuclease ramp protein cas6 | CALAB_RS00280 | Not Available | Negative | 82072 - 82998 | 35754.8 |
| nicotinate-nucleotide adenylyltransferase | CALAB_RS00285 | Not Available | Negative | 83555 - 84199 | 24748.0 |
| outer membrane protein assembly factor bamd | CALAB_RS00290 | Not Available | Negative | 84168 - 84944 | 30072.9 |
| hypothetical protein | CALAB_RS00295 | Not Available | Negative | 85027 - 85563 | 20933.2 |
| gfo/idh/moca family protein | CALAB_RS00300 | Not Available | Negative | 85862 - 86875 | 38812.7 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | CALAB_RS00305 | Not Available | Negative | 86894 - 87970 | 39995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
