Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ALPR1_RS04875 | Not Available | Negative | 1119808 - 1121640 | 68027.9 |
| hypothetical protein | ALPR1_RS21070 | Not Available | Negative | 1121700 - 1122389 | 26516.1 |
| hypothetical protein | ALPR1_RS21075 | Not Available | Negative | 1122374 - 1123399 | 39601.2 |
| type b 50s ribosomal protein l31 | ALPR1_RS04885 | Not Available | Positive | 1123580 - 1123828 | 9754.51 |
| glmu family protein | ALPR1_RS04890 | Not Available | Positive | 1123898 - 1125094 | 44303.8 |
| atp-binding protein | ALPR1_RS04895 | Not Available | Positive | 1125107 - 1126246 | 43242.1 |
| atp-dependent zinc protease | ALPR1_RS04900 | Not Available | Positive | 1126248 - 1126697 | 17195.0 |
| 30s ribosomal protein s6--l-glutamate ligase | ALPR1_RS04905 | Not Available | Positive | 1126725 - 1127633 | 32269.7 |
| hydroxymethylbilane synthase | ALPR1_RS04910 | Not Available | Positive | 1127630 - 1128568 | 33961.2 |
| peptidylprolyl isomerase | ALPR1_RS04915 | Not Available | Positive | 1128568 - 1129413 | 31936.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
