Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | ALPR1_RS04730 | Not Available | Negative | 1092505 - 1092687 | 6986.67 |
| 50s ribosomal protein l28 | ALPR1_RS04735 | Not Available | Negative | 1092718 - 1092960 | 9087.2 |
| duf5522 domain-containing protein | ALPR1_RS20880 | Not Available | Negative | 1093063 - 1093221 | 6023.11 |
| ornithine--oxo-acid transaminase | ALPR1_RS04740 | Not Available | Positive | 1093298 - 1094533 | 44949.0 |
| had family hydrolase | ALPR1_RS04745 | Not Available | Positive | 1094535 - 1095188 | 24568.4 |
| porphobilinogen synthase | ALPR1_RS04750 | Not Available | Positive | 1095190 - 1096158 | 36059.1 |
| ammonium transporter | ALPR1_RS04755 | Not Available | Positive | 1096680 - 1097975 | 45446.4 |
| porin | ALPR1_RS04760 | Not Available | Positive | 1098078 - 1099250 | 41546.1 |
| hypothetical protein | ALPR1_RS04765 | Not Available | Positive | 1099543 - 1099902 | 13555.5 |
| co-chaperone groes family protein | ALPR1_RS04770 | Not Available | Negative | 1099952 - 1100326 | 13996.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
