Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa carboxylase subunit beta | ALPR1_RS04635 | Not Available | Positive | 1071838 - 1073421 | 57586.9 |
| m20/m25/m40 family metallo-hydrolase | ALPR1_RS04640 | Not Available | Positive | 1073780 - 1074862 | 39976.6 |
| abc transporter substrate-binding protein | ALPR1_RS04645 | Not Available | Positive | 1074893 - 1075657 | 29451.9 |
| duf1080 domain-containing protein | ALPR1_RS04650 | Not Available | Positive | 1075784 - 1076548 | 28416.0 |
| duf1080 domain-containing protein | ALPR1_RS04655 | Not Available | Positive | 1076545 - 1077141 | 22227.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1077617 - 1079138 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1079269 - 1082137 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1082278 - 1082389 | Not Available |
| dihydroorotase | ALPR1_RS04680 | Not Available | Positive | 1082919 - 1084160 | 46352.4 |
| duf4199 domain-containing protein | ALPR1_RS04685 | Not Available | Positive | 1084153 - 1084665 | 19063.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
