Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system pemk/mazf family toxin | ALPR1_RS04535 | Not Available | Negative | 1049690 - 1050022 | 12216.1 |
| ribbon-helix-helix domain-containing protein | ALPR1_RS04540 | Not Available | Negative | 1050009 - 1050251 | 9180.96 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | ALPR1_RS04545 | Not Available | Negative | 1050332 - 1051141 | 30133.4 |
| dihydroxy-acid dehydratase | ALPR1_RS04550 | Not Available | Positive | 1051663 - 1053342 | 59730.9 |
| biosynthetic-type acetolactate synthase large subunit | ALPR1_RS04555 | Not Available | Positive | 1053347 - 1055041 | 62249.9 |
| acetolactate synthase small subunit | ALPR1_RS04560 | Not Available | Positive | 1055051 - 1055551 | 18894.1 |
| ketol-acid reductoisomerase | ALPR1_RS04565 | Not Available | Positive | 1055717 - 1056760 | 38324.4 |
| 2-isopropylmalate synthase | ALPR1_RS04570 | Not Available | Positive | 1056779 - 1058287 | 54648.5 |
| 3-isopropylmalate dehydratase large subunit | ALPR1_RS04575 | Not Available | Positive | 1058292 - 1059698 | 50832.7 |
| 3-isopropylmalate dehydratase small subunit | ALPR1_RS04580 | Not Available | Positive | 1059787 - 1060377 | 22127.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
