Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenide, water dikinase seld | ALPR1_RS04485 | Not Available | Negative | 1036907 - 1037947 | 37405.9 |
| trna 2-selenouridine(34) synthase mnmh | ALPR1_RS04490 | Not Available | Negative | 1037919 - 1038974 | 40498.1 |
| thioredoxin | ALPR1_RS04495 | Not Available | Negative | 1039043 - 1039381 | 12087.7 |
| dna polymerase iii subunit alpha | ALPR1_RS04500 | Not Available | Negative | 1039492 - 1043778 | 160684.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | ALPR1_RS04505 | Not Available | Negative | 1044065 - 1044709 | 25009.0 |
| rna polymerase sigma factor | ALPR1_RS04510 | Not Available | Negative | 1044709 - 1045320 | 23949.7 |
| glycosyltransferase | ALPR1_RS04515 | Not Available | Negative | 1045311 - 1046447 | 43719.4 |
| trna guanosine(34) transglycosylase tgt | ALPR1_RS04520 | Not Available | Positive | 1046569 - 1047699 | 42250.0 |
| lptf/lptg family permease | ALPR1_RS04525 | Not Available | Positive | 1047703 - 1048776 | 40784.1 |
| dmt family transporter | ALPR1_RS04530 | Not Available | Positive | 1048777 - 1049685 | 33561.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
