Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine deaminase | ALPR1_RS04435 | Not Available | Negative | 1027342 - 1028970 | 59108.2 |
| (d)cmp kinase | ALPR1_RS04440 | Not Available | Positive | 1029102 - 1029809 | 25971.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ALPR1_RS04445 | Not Available | Positive | 1029790 - 1030686 | 33984.5 |
| na(+)-translocating nadh-quinone reductase subunit a | ALPR1_RS04450 | Not Available | Positive | 1030824 - 1032176 | 49001.0 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | ALPR1_RS04455 | Not Available | Positive | 1032180 - 1033379 | 42908.4 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit c | ALPR1_RS04460 | Not Available | Positive | 1033366 - 1034130 | 27503.6 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | ALPR1_RS04465 | Not Available | Positive | 1034162 - 1034845 | 24742.0 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | ALPR1_RS04470 | Not Available | Positive | 1034860 - 1035471 | 21724.5 |
| duf1080 domain-containing protein | ALPR1_RS04475 | Not Available | Positive | 1035603 - 1036226 | 23566.5 |
| duf502 domain-containing protein | ALPR1_RS04480 | Not Available | Positive | 1036306 - 1036860 | 20442.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
