Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | ALPR1_RS04385 | Not Available | Positive | 1016138 - 1017133 | 35961.0 |
| nucleotide exchange factor grpe | ALPR1_RS04390 | Not Available | Positive | 1017209 - 1017781 | 21703.5 |
| molecular chaperone dnaj | ALPR1_RS04395 | Not Available | Positive | 1017789 - 1018901 | 39914.7 |
| hypothetical protein | ALPR1_RS04400 | Not Available | Positive | 1018982 - 1019869 | 32876.1 |
| abc transporter atp-binding protein | ALPR1_RS04405 | Not Available | Positive | 1019887 - 1020780 | 33664.1 |
| abc transporter permease | ALPR1_RS04410 | Not Available | Positive | 1020773 - 1022083 | 48743.2 |
| dps family protein | ALPR1_RS04415 | Not Available | Negative | 1022256 - 1022726 | 17972.3 |
| sensor histidine kinase | ALPR1_RS04420 | Not Available | Positive | 1022864 - 1024099 | 47086.0 |
| peptide chain release factor 3 | ALPR1_RS04425 | Not Available | Positive | 1024365 - 1025945 | 60266.4 |
| hypothetical protein | ALPR1_RS04430 | Not Available | Negative | 1026012 - 1027328 | 50362.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
