Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | ALPR1_RS04335 | Not Available | Positive | 1007701 - 1008105 | 14513.5 |
| l-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | ALPR1_RS04340 | Not Available | Positive | 1008144 - 1009052 | 31601.1 |
| hypothetical protein | ALPR1_RS04345 | Not Available | Negative | 1009041 - 1009499 | 17007.6 |
| calcium/sodium antiporter | ALPR1_RS04350 | Not Available | Negative | 1009496 - 1010434 | 33689.4 |
| uracil phosphoribosyltransferase | ALPR1_RS04355 | Not Available | Negative | 1010440 - 1011090 | 24249.3 |
| ompa family protein | ALPR1_RS04360 | Not Available | Negative | 1011155 - 1012447 | 47327.2 |
| ompa family protein | ALPR1_RS04365 | Not Available | Negative | 1012568 - 1013848 | 46312.1 |
| aminopeptidase | ALPR1_RS04370 | Not Available | Positive | 1014021 - 1014929 | 33958.2 |
| hypoxanthine phosphoribosyltransferase | ALPR1_RS04375 | Not Available | Positive | 1014940 - 1015476 | 20070.2 |
| adenylate kinase | ALPR1_RS04380 | Not Available | Positive | 1015492 - 1016064 | 21337.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
