Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 57 protein | ALPR1_RS04285 | Not Available | Negative | 993362 - 994567 | 47236.9 |
| glycosyltransferase family 4 protein | ALPR1_RS04290 | Not Available | Negative | 994564 - 995853 | 48287.0 |
| amylo-alpha-1,6-glucosidase | ALPR1_RS04295 | Not Available | Negative | 995865 - 997781 | 73041.0 |
| Trna-his | Not Available | Not Available | Positive | 998125 - 998200 | Not Available |
| dihydroorotase | ALPR1_RS04305 | Not Available | Negative | 998278 - 999621 | 50098.6 |
| dead/deah box helicase | ALPR1_RS04310 | Not Available | Positive | 999670 - 1001031 | 51259.4 |
| m28 family peptidase | ALPR1_RS04315 | Not Available | Negative | 1001115 - 1002611 | 55841.0 |
| aminomethyl-transferring glycine dehydrogenase | ALPR1_RS04320 | Not Available | Positive | 1002887 - 1005775 | 104929.0 |
| lipoyl synthase | ALPR1_RS04325 | Not Available | Negative | 1005968 - 1006846 | 33336.2 |
| hypothetical protein | ALPR1_RS04330 | Not Available | Negative | 1006901 - 1007629 | 27283.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
