Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS04085 | Not Available | Negative | 955548 - 955739 | 6815.16 |
| hypothetical protein | ALPR1_RS04090 | Not Available | Negative | 955744 - 955941 | 7513.72 |
| amidohydrolase | ALPR1_RS04095 | Not Available | Negative | 956273 - 957976 | 62651.7 |
| t9ss type a sorting domain-containing protein | ALPR1_RS04100 | Not Available | Negative | 958039 - 960123 | 77796.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ALPR1_RS04105 | Not Available | Positive | 960214 - 961509 | 47826.9 |
| duf2461 domain-containing protein | ALPR1_RS04110 | Not Available | Positive | 961574 - 962251 | 26097.3 |
| cof-type had-iib family hydrolase | ALPR1_RS04115 | Not Available | Negative | 962237 - 963055 | 30453.2 |
| hypothetical protein | ALPR1_RS04120 | Not Available | Negative | 963055 - 963327 | 10216.7 |
| hypothetical protein | ALPR1_RS04125 | Not Available | Negative | 963343 - 963777 | 16376.5 |
| hypothetical protein | ALPR1_RS04130 | Not Available | Negative | 963804 - 964229 | 16069.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
