Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | ALPR1_RS03895 | Not Available | Negative | 900266 - 900949 | 26290.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | ALPR1_RS03900 | Not Available | Negative | 900946 - 901428 | 17701.6 |
| m16 family metallopeptidase | ALPR1_RS03905 | Not Available | Negative | 901425 - 902666 | 46653.5 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | ALPR1_RS03910 | Not Available | Positive | 902869 - 904428 | 59592.1 |
| 5-formyltetrahydrofolate cyclo-ligase | ALPR1_RS03915 | Not Available | Positive | 904425 - 904997 | 22020.1 |
| hypothetical protein | ALPR1_RS03920 | Not Available | Positive | 905029 - 905526 | 19060.5 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS03925 | Not Available | Positive | 906104 - 909301 | 115565.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALPR1_RS03930 | Not Available | Positive | 909320 - 910963 | 60391.5 |
| hypothetical protein | ALPR1_RS03935 | Not Available | Positive | 910985 - 911929 | 33770.2 |
| ipt/tig domain-containing protein | ALPR1_RS03940 | Not Available | Positive | 912372 - 913829 | 54091.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
