Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5606 domain-containing protein | ALPR1_RS03795 | Not Available | Negative | 884777 - 885199 | 15710.8 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | ALPR1_RS03800 | Not Available | Negative | 885240 - 885851 | 22914.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | ALPR1_RS03805 | Not Available | Positive | 885975 - 886697 | 26827.8 |
| outer membrane beta-barrel protein | ALPR1_RS03810 | Not Available | Positive | 886724 - 887443 | 27026.8 |
| sdr family nad(p)-dependent oxidoreductase | ALPR1_RS03815 | Not Available | Positive | 887582 - 888337 | 27308.1 |
| m15 family metallopeptidase | ALPR1_RS03820 | Not Available | Positive | 888337 - 889107 | 28722.0 |
| thua domain-containing protein | ALPR1_RS03825 | Not Available | Positive | 889146 - 889880 | 27734.0 |
| nifu family protein | ALPR1_RS03830 | Not Available | Positive | 889961 - 890542 | 21302.3 |
| duf3810 domain-containing protein | ALPR1_RS03835 | Not Available | Positive | 890556 - 891629 | 41158.2 |
| peptidoglycan dd-metalloendopeptidase family protein | ALPR1_RS03840 | Not Available | Positive | 891689 - 892588 | 33860.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
