Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lola family protein | ALPR1_RS03745 | Not Available | Negative | 874655 - 875308 | 24505.1 |
| ftsk/spoiiie family dna translocase | ALPR1_RS03750 | Not Available | Negative | 875344 - 877860 | 93394.5 |
| quinone-dependent dihydroorotate dehydrogenase | ALPR1_RS03755 | Not Available | Negative | 877914 - 878954 | 38089.3 |
| site-specific tyrosine recombinase xerd | ALPR1_RS03760 | Not Available | Negative | 879231 - 880136 | 35007.4 |
| type ii 3-dehydroquinate dehydratase | ALPR1_RS03765 | Not Available | Positive | 880267 - 880680 | 15346.4 |
| aminotransferase class v-fold plp-dependent enzyme | ALPR1_RS03770 | Not Available | Positive | 880694 - 881749 | 39156.8 |
| marc family protein | ALPR1_RS03775 | Not Available | Positive | 881966 - 882556 | 20874.6 |
| ribonuclease hi | ALPR1_RS03780 | Not Available | Positive | 882593 - 883060 | 17422.0 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS03785 | Not Available | Negative | 883115 - 884236 | 42307.2 |
| hypothetical protein | ALPR1_RS03790 | Not Available | Negative | 884441 - 884740 | 11904.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
