Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | ALPR1_RS03645 | Not Available | Positive | 857330 - 857563 | 9059.84 |
| Trna-arg | Not Available | Not Available | Positive | 857568 - 857639 | Not Available |
| sdr family oxidoreductase | ALPR1_RS03655 | Not Available | Negative | 857655 - 858452 | 28626.4 |
| voc family protein | ALPR1_RS03660 | Not Available | Negative | 858569 - 858940 | 13722.2 |
| serine hydrolase domain-containing protein | ALPR1_RS03665 | Not Available | Negative | 859166 - 860203 | 38987.6 |
| acyltransferase family protein | ALPR1_RS03670 | Not Available | Negative | 860246 - 861397 | 44756.6 |
| ankyrin repeat domain-containing protein | ALPR1_RS03675 | Not Available | Negative | 861420 - 861992 | 20723.1 |
| helix-turn-helix domain-containing protein | ALPR1_RS03680 | Not Available | Positive | 862229 - 864307 | 79140.7 |
| smp-30/gluconolactonase/lre family protein | ALPR1_RS03685 | Not Available | Negative | 864335 - 865213 | 33470.5 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS03690 | Not Available | Negative | 865313 - 866200 | 34107.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
