Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS03590 | Not Available | Negative | 849903 - 850106 | 7811.25 |
| glutamate--trna ligase | ALPR1_RS03595 | Not Available | Negative | 850118 - 851656 | 57398.5 |
| hypothetical protein | ALPR1_RS03600 | Not Available | Positive | 852170 - 852409 | 8905.56 |
| hypothetical protein | ALPR1_RS03605 | Not Available | Positive | 852577 - 853149 | 21812.1 |
| hypothetical protein | ALPR1_RS03610 | Not Available | Negative | 853304 - 853594 | 11027.5 |
| thua domain-containing protein | ALPR1_RS03615 | Not Available | Negative | 853664 - 854527 | 33400.3 |
| 50s ribosomal protein l19 | ALPR1_RS03620 | Not Available | Negative | 854564 - 854929 | 13985.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | ALPR1_RS03625 | Not Available | Negative | 854981 - 855697 | 26332.5 |
| ribosome maturation factor rimm | ALPR1_RS03630 | Not Available | Negative | 855701 - 856231 | 20159.9 |
| 30s ribosomal protein s16 | ALPR1_RS03635 | Not Available | Negative | 856247 - 856840 | 21445.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
