Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | ALPR1_RS03300 | Not Available | Positive | 779080 - 781524 | 91902.2 |
| dna alkylation repair protein | ALPR1_RS03305 | Not Available | Positive | 781546 - 782262 | 28280.1 |
| abc-f family atp-binding cassette domain-containing protein | ALPR1_RS03310 | Not Available | Negative | 782875 - 784785 | 72652.6 |
| 6-bladed beta-propeller | ALPR1_RS03315 | Not Available | Negative | 784932 - 786125 | 46430.3 |
| hypothetical protein | ALPR1_RS03320 | Not Available | Negative | 786176 - 786391 | 7783.1 |
| peptide deformylase | ALPR1_RS03325 | Not Available | Positive | 786564 - 787049 | 19142.2 |
| carbamoyl-phosphate synthase large subunit | ALPR1_RS03330 | Not Available | Positive | 787199 - 790018 | 104939.0 |
| duf4834 family protein | ALPR1_RS03335 | Not Available | Positive | 790044 - 790301 | 9973.07 |
| class i sam-dependent methyltransferase | ALPR1_RS03340 | Not Available | Negative | 790418 - 791602 | 44888.0 |
| aspartate-semialdehyde dehydrogenase | ALPR1_RS03345 | Not Available | Negative | 791602 - 792591 | 36328.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
