Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit beta | ALPR1_RS03200 | Not Available | Positive | 759266 - 760768 | 54288.3 |
| atp synthase f1 subunit epsilon | ALPR1_RS03205 | Not Available | Positive | 760831 - 761076 | 8510.22 |
| glycoside hydrolase family 16 protein | ALPR1_RS03210 | Not Available | Positive | 761264 - 762097 | 31936.3 |
| alpha-l-fucosidase | ALPR1_RS03215 | Not Available | Negative | 762331 - 763677 | 51437.8 |
| 30s ribosomal protein s21 | ALPR1_RS03220 | Not Available | Positive | 763817 - 764011 | 7484.21 |
| tyrosine-type recombinase/integrase | ALPR1_RS03225 | Not Available | Positive | 764129 - 765013 | 34024.1 |
| ribosome hibernation-promoting factor, hpf/yfia family | ALPR1_RS03230 | Not Available | Positive | 765049 - 765354 | 11958.5 |
| arnt family glycosyltransferase | ALPR1_RS03235 | Not Available | Positive | 765372 - 766931 | 59939.4 |
| arnt family glycosyltransferase | ALPR1_RS03240 | Not Available | Negative | 766928 - 768604 | 62739.1 |
| glycosyltransferase family 2 protein | ALPR1_RS03245 | Not Available | Positive | 768726 - 769667 | 35424.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
