Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf294 nucleotidyltransferase-like domain-containing protein | ALPR1_RS02850 | Not Available | Negative | 691956 - 693902 | 73177.7 |
| hypothetical protein | ALPR1_RS02855 | Not Available | Positive | 694010 - 694183 | 6769.21 |
| acetate--coa ligase | ALPR1_RS02860 | Not Available | Negative | 694309 - 696201 | 70804.3 |
| sodium:solute symporter family protein | ALPR1_RS02865 | Not Available | Negative | 696254 - 697939 | 60082.9 |
| duf4212 domain-containing protein | ALPR1_RS02870 | Not Available | Negative | 697967 - 698230 | 10302.8 |
| hypothetical protein | ALPR1_RS21055 | Not Available | Negative | 698411 - 698854 | 15763.4 |
| hypothetical protein | ALPR1_RS21060 | Not Available | Negative | 698911 - 699162 | 9288.83 |
| fad:protein fmn transferase | ALPR1_RS02880 | Not Available | Negative | 699282 - 700346 | 39360.4 |
| holliday junction branch migration dna helicase ruvb | ALPR1_RS02885 | Not Available | Positive | 700470 - 701504 | 38213.1 |
| 6-phosphogluconolactonase | ALPR1_RS02890 | Not Available | Negative | 701566 - 702279 | 26502.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
