Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ccmd family protein | ALPR1_RS02800 | Not Available | Positive | 680146 - 680388 | 8850.05 |
| cytochrome c maturation protein ccme | ALPR1_RS02805 | Not Available | Positive | 680401 - 680817 | 15122.0 |
| cytochrome c biogenesis protein ccsa | ALPR1_RS02810 | Not Available | Positive | 680844 - 683363 | 95274.5 |
| phenylalanine--trna ligase subunit alpha | ALPR1_RS02815 | Not Available | Negative | 683433 - 684461 | 38691.5 |
| fasciclin domain-containing protein | ALPR1_RS02820 | Not Available | Positive | 684661 - 685227 | 19981.4 |
| bf3164 family lipoprotein | ALPR1_RS02825 | Not Available | Negative | 685285 - 686355 | 40879.5 |
| tonb-dependent receptor | ALPR1_RS02830 | Not Available | Negative | 686483 - 689332 | 106173.0 |
| bacillithiol system redox-active protein ytxj | ALPR1_RS02835 | Not Available | Negative | 689454 - 689792 | 12952.3 |
| duf4403 family protein | ALPR1_RS02840 | Not Available | Positive | 689865 - 691262 | 51885.2 |
| polc-type dna polymerase iii | ALPR1_RS02845 | Not Available | Negative | 691288 - 691959 | 25464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
