Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS02650 | Not Available | Positive | 644803 - 644988 | 7300.91 |
| ammonium transporter | ALPR1_RS02655 | Not Available | Negative | 645061 - 646290 | 43693.4 |
| p-ii family nitrogen regulator | ALPR1_RS02660 | Not Available | Negative | 646324 - 646662 | 12657.3 |
| nucleotidyltransferase family protein | ALPR1_RS02665 | Not Available | Positive | 646940 - 647842 | 33515.2 |
| dna replication/repair protein recf | ALPR1_RS02670 | Not Available | Negative | 647873 - 648973 | 41734.3 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | ALPR1_RS02675 | Not Available | Positive | 649065 - 650084 | 37819.2 |
| tetratricopeptide repeat protein | ALPR1_RS02680 | Not Available | Positive | 650359 - 651072 | 26565.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | ALPR1_RS02685 | Not Available | Positive | 651157 - 651633 | 16940.2 |
| aspartate kinase | ALPR1_RS02690 | Not Available | Positive | 651665 - 652984 | 48495.6 |
| duf6787 family protein | ALPR1_RS02695 | Not Available | Positive | 653044 - 653370 | 12742.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
