Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen/starch synthase | ALPR1_RS02490 | Not Available | Positive | 607672 - 608484 | 31089.5 |
| duf4270 family protein | ALPR1_RS02495 | Not Available | Positive | 608444 - 609829 | 51182.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | ALPR1_RS02500 | Not Available | Positive | 609949 - 611790 | 67841.5 |
| kazal-type serine protease inhibitor domain-containing protein | ALPR1_RS02505 | Not Available | Negative | 611823 - 612050 | 8149.56 |
| peptide chain release factor 1 | ALPR1_RS02520 | Not Available | Positive | 613172 - 614248 | 40406.0 |
| gnat family n-acetyltransferase | ALPR1_RS02525 | Not Available | Positive | 614335 - 614865 | 20186.1 |
| ycf48-related protein | ALPR1_RS02530 | Not Available | Negative | 614879 - 617686 | 101048.0 |
| duf3365 domain-containing protein | ALPR1_RS02535 | Not Available | Positive | 617716 - 618480 | 28921.7 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS02540 | Not Available | Positive | 618807 - 621959 | 116548.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALPR1_RS02545 | Not Available | Positive | 621973 - 623832 | 69689.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
