Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | ALPR1_RS02440 | Not Available | Positive | 600163 - 600762 | 22152.8 |
| phage holin family protein | ALPR1_RS02445 | Not Available | Positive | 600823 - 601194 | 14068.7 |
| hypothetical protein | ALPR1_RS02450 | Not Available | Positive | 601178 - 601564 | 14253.2 |
| geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase | ALPR1_RS02455 | Not Available | Positive | 601536 - 602315 | 28176.1 |
| arac family transcriptional regulator | ALPR1_RS02460 | Not Available | Negative | 602301 - 603227 | 35674.1 |
| acyl-coa dehydrogenase | ALPR1_RS02465 | Not Available | Negative | 603368 - 604507 | 41605.7 |
| zinc metallopeptidase | ALPR1_RS02470 | Not Available | Negative | 604603 - 605289 | 24749.1 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | ALPR1_RS02475 | Not Available | Negative | 605319 - 606323 | 37290.9 |
| aspartate 1-decarboxylase | ALPR1_RS02480 | Not Available | Negative | 606323 - 606670 | 12740.4 |
| pantoate--beta-alanine ligase | ALPR1_RS02485 | Not Available | Negative | 606692 - 607540 | 31958.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
