Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein signal peptidase | ALPR1_RS02390 | Not Available | Positive | 585917 - 586561 | 24239.4 |
| dead/deah box helicase | ALPR1_RS02395 | Not Available | Positive | 586784 - 589708 | 112606.0 |
| phoh family protein | ALPR1_RS02400 | Not Available | Positive | 589896 - 591242 | 51471.0 |
| hypothetical protein | ALPR1_RS02405 | Not Available | Positive | 592182 - 592427 | 9091.04 |
| lytr/algr family response regulator transcription factor | ALPR1_RS02410 | Not Available | Negative | 592510 - 593265 | 28660.6 |
| lytr/algr family response regulator transcription factor | ALPR1_RS02415 | Not Available | Negative | 593395 - 594129 | 28196.9 |
| sensor histidine kinase | ALPR1_RS02420 | Not Available | Negative | 594148 - 595200 | 40459.5 |
| excinuclease abc subunit uvra | ALPR1_RS02425 | Not Available | Negative | 595284 - 598112 | 105606.0 |
| lytic transglycosylase domain-containing protein | ALPR1_RS02430 | Not Available | Negative | 598324 - 599265 | 35830.9 |
| tigr00730 family rossman fold protein | ALPR1_RS02435 | Not Available | Negative | 599265 - 599987 | 27459.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
