Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | ALPR1_RS02295 | Not Available | Negative | 559531 - 560490 | 36502.1 |
| simpl domain-containing protein | ALPR1_RS02300 | Not Available | Negative | 560492 - 561223 | 27132.1 |
| m14 family zinc carboxypeptidase | ALPR1_RS02305 | Not Available | Negative | 561327 - 562808 | 56001.5 |
| dipeptide epimerase | ALPR1_RS02310 | Not Available | Positive | 562896 - 563906 | 37378.1 |
| response regulator transcription factor | ALPR1_RS02315 | Not Available | Negative | 564041 - 564733 | 26446.1 |
| sensor histidine kinase | ALPR1_RS02320 | Not Available | Negative | 564730 - 566442 | 64854.6 |
| diaminopimelate decarboxylase | ALPR1_RS02325 | Not Available | Positive | 566659 - 567891 | 45457.2 |
| type ix secretion system membrane protein porp/sprf | ALPR1_RS02330 | Not Available | Positive | 568122 - 569165 | 38713.9 |
| t9ss c-terminal target domain-containing protein | ALPR1_RS02335 | Not Available | Positive | 569537 - 571603 | 74208.4 |
| type ix secretion system membrane protein porp/sprf | ALPR1_RS02340 | Not Available | Positive | 571607 - 572629 | 37754.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
