Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | ALPR1_RS02200 | Not Available | Negative | 536872 - 537912 | 38633.5 |
| duf3052 family protein | ALPR1_RS02205 | Not Available | Negative | 538124 - 538540 | 15726.0 |
| p1 family peptidase | ALPR1_RS02210 | Not Available | Negative | 538543 - 539664 | 39351.6 |
| endonuclease iii | ALPR1_RS02215 | Not Available | Positive | 539769 - 540434 | 25422.9 |
| asparagine synthase (glutamine-hydrolyzing) | ALPR1_RS02220 | Not Available | Positive | 540434 - 542209 | 68641.8 |
| glycosyltransferase family 4 protein | ALPR1_RS02225 | Not Available | Positive | 542206 - 543429 | 46659.1 |
| fasciclin domain-containing protein | ALPR1_RS02230 | Not Available | Positive | 543608 - 544564 | 33591.6 |
| gliding motility lipoprotein gldb | ALPR1_RS02235 | Not Available | Negative | 544644 - 545651 | 39245.2 |
| spasm domain-containing protein | ALPR1_RS02240 | Not Available | Positive | 545759 - 546763 | 38859.4 |
| slbb domain-containing protein | ALPR1_RS02245 | Not Available | Positive | 546894 - 549482 | 95985.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
