Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | ALPR1_RS20165 | Not Available | Negative | 474024 - 477737 | 135733.0 |
| hypothetical protein | ALPR1_RS02055 | Not Available | Negative | 478347 - 478874 | 19931.1 |
| tetratricopeptide repeat protein | ALPR1_RS02060 | Not Available | Positive | 479115 - 481013 | 72092.4 |
| lytr/algr family response regulator transcription factor | ALPR1_RS02065 | Not Available | Positive | 481010 - 481741 | 27828.9 |
| tetratricopeptide repeat protein | ALPR1_RS02070 | Not Available | Negative | 481832 - 484003 | 81280.0 |
| s8 family serine peptidase | ALPR1_RS02075 | Not Available | Negative | 484213 - 490383 | 222918.0 |
| sensor histidine kinase | ALPR1_RS20960 | Not Available | Negative | 490777 - 494175 | 126519.0 |
| duf6090 family protein | ALPR1_RS02085 | Not Available | Negative | 494516 - 495298 | 30510.8 |
| sensor histidine kinase | ALPR1_RS20175 | Not Available | Negative | 495303 - 497462 | 81835.4 |
| sensor histidine kinase | ALPR1_RS21050 | Not Available | Negative | 497459 - 502375 | 188271.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
