Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysoplasmalogenase | ALPR1_RS20065 | Not Available | Positive | 4738544 - 4739233 | 26021.1 |
| duf3820 family protein | ALPR1_RS20070 | Not Available | Positive | 4739263 - 4739478 | 8532.65 |
| n-acetylglucosamine-6-phosphate deacetylase | ALPR1_RS20075 | Not Available | Negative | 4739495 - 4740649 | 42459.1 |
| sodium:solute symporter family protein | ALPR1_RS20080 | Not Available | Negative | 4740660 - 4742132 | 53441.7 |
| 6-phosphogluconolactonase | ALPR1_RS20085 | Not Available | Negative | 4742136 - 4742906 | 28904.9 |
| aspartate--trna ligase | ALPR1_RS20090 | Not Available | Negative | 4743080 - 4744834 | 66405.3 |
| m23 family metallopeptidase | ALPR1_RS20095 | Not Available | Positive | 4745164 - 4746489 | 49495.9 |
| ompa family protein | ALPR1_RS20100 | Not Available | Negative | 4746559 - 4748964 | 91021.4 |
| type ix secretion system membrane protein porp/sprf | ALPR1_RS20105 | Not Available | Negative | 4748967 - 4749944 | 36651.4 |
| t9ss c-terminal target domain-containing protein | ALPR1_RS20870 | Not Available | Negative | 4750016 - 4778365 | 990270.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
