Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate:h+ symporter | ALPR1_RS20015 | Not Available | Positive | 4722852 - 4724165 | 46446.6 |
| rida family protein | ALPR1_RS20020 | Not Available | Positive | 4724188 - 4724661 | 16836.6 |
| transglycosylase slt domain-containing protein | ALPR1_RS20025 | Not Available | Negative | 4724658 - 4726052 | 53168.4 |
| tolc family protein | ALPR1_RS20030 | Not Available | Negative | 4726188 - 4727534 | 51096.8 |
| efflux rnd transporter permease subunit | ALPR1_RS20035 | Not Available | Negative | 4727534 - 4730596 | 112506.0 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS20040 | Not Available | Negative | 4730598 - 4731680 | 39749.6 |
| alpha/beta fold hydrolase | ALPR1_RS20045 | Not Available | Negative | 4731702 - 4732484 | 30367.2 |
| duf481 domain-containing protein | ALPR1_RS20050 | Not Available | Negative | 4732634 - 4733707 | 40529.0 |
| duf481 domain-containing protein | ALPR1_RS20055 | Not Available | Negative | 4733695 - 4734765 | 40169.2 |
| carboxypeptidase regulatory-like domain-containing protein | ALPR1_RS20060 | Not Available | Negative | 4734857 - 4738198 | 121720.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
